BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D10SP1|AL426520
(836 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1470 1614 0.0
>3x_Contig1470
Length = 8270
Score = 1614 bits (812), Expect = 0.0
Identities = 825/830 (99%), Gaps = 1/830 (0%)
Strand = Plus / Plus
Query: 1 gatcgatgatngtgaacttcatgtgggttctcgggctgttcgatgaaatgtcttctgttg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gatcgatgat-gtgaacttcatgtgggttctcgggctgttcgatgaaatgtcttctgttg 921
Query: 61 gagctgttggaagtcagtgggaagaacaatacaataatcttgtgaagactggtcataaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 gagctgttggaagtcagtgggaagaacaatacaataatcttgtgaagactggtcataaag 981
Query: 121 tcgataaagagaatccctatcaagaaatagttgaactatctctcaaatctatcaatttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 tcgataaagagaatccctatcaagaaatagttgaactatctctcaaatctatcaatttaa 1041
Query: 181 ctacacatcttcttaatacaaaamccaccgtctcgaaaagtgaaattatcgcgattattc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ctacacatcttcttaatacaaaacccaccgtctcgaaaagtgaaattatcgcgattattc 1101
Query: 241 aagcattatcacatcagtgcttgaatccttgttttcaattacgttcttatgctctaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 aagcattatcacatcagtgcttgaatccttgttttcaattacgttcttatgctctaagct 1161
Query: 301 ccctcgaaaatctacttctaaaamtgttggagccatttgttgataatgtgatttcagtta 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1162 ccctcgaaaatctacttctaaaactgttggagccatttgttgataatgtgatttcagtta 1221
Query: 361 tagcccttattgaaatgggtttatatccgctaacaaatgaagttgacgctgattccagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 tagcccttattgaaatgggtttatatccgctaacaaatgaagttgacgctgattccagaa 1281
Query: 421 aagcggtacctttgcagaacttcttgtcgttgttatcaaaactatatctacattacttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 aagcggtacctttgcagaacttcttgtcgttgttatcaaaactatatctacattacttgt 1341
Query: 481 ctttagagaagactgacaatgaaacttatttgaaagtgttgagtatttttaataagcatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 ctttagagaagactgacaatgaaacttatttgaaagtgttgagtatttttaataagcatg 1401
Query: 541 tcgatgaaggaaaggtagaagaacaattacaagacatgatcactaagaaacgtgaaattg 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 tcgatgacggaaaggtagaagaacaattacaagacatgatcactaagaaacgtgaaattg 1461
Query: 601 agaagaagcaaggtacaccaagcacagatgctgagtcggtgcccgctgaacctaccccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 agaagaagcaaggtacaccaagcacagatgctgagtcggtgcccgctgaacctaccccag 1521
Query: 661 tttcaaaataaacattgtgtgtcccgcactatgataaattccaaacgtccataattgaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 tttcaaaataaacattgtgtgtcccgcactatgataaattccaaacgtccataattgaac 1581
Query: 721 agatgcattagaatgttaattaaactgtcttgtctactaataaatatttacagatttcat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 agatgcattagaatgttaattaaactgtcttgtctactaataaatatttacagatttcat 1641
Query: 781 ttataaatttttttcattgcagtcgtttatactcctcaggagaacgcrgt 830
||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1642 ttataaatttttttcattgcagtcgtttatactcctcaggagaacgcagt 1691
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6939
Number of Sequences: 1807
Number of extensions: 6939
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 836
length of database: 10,358,551
effective HSP length: 16
effective length of query: 820
effective length of database: 10,329,639
effective search space: 8470303980
effective search space used: 8470303980
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)